The Akatsuki could also be antagonists in an Iruka kidnapped fanfiction. They might believe that Iruka has some information about the jinchuriki, especially since he is close to Naruto. Or there could be a new, made - up antagonist in the fanfiction, like a powerful dark wizard who has set his sights on Iruka for some unknown but sinister reason. This new antagonist could add a fresh and unique element to the story.
In some fanfictions, Iruka is kidnapped by a group that has a vendetta against Konoha. They see Iruka as an easy target, being a teacher rather than a front - line ninja. However, they underestimate his own skills and determination. Another plot could be that Iruka is kidnapped by a magical being from another realm who mistakes him for someone with great magical potential, and the story then follows his attempts to escape and return to his own world.
One possible antagonist could be the Akatsuki members. They are always looking for strong opponents or valuable information. Maybe they target Iruka because they think he has some knowledge about Naruto that they can use, and Kakashi has to stop them.
Sam is also a probable candidate. Given her feisty nature, it could lead to some interesting scenarios where she tries to fight back against the kidnapper. And her relationship with Carly and Freddie would drive them to take action.
The Naraku would be a likely kidnapper. He is always plotting against Inuyasha and trying to get his hands on the Tessaiga. Kidnapping Inuyasha would be a way for him to either steal the sword or find a way to break Inuyasha's spirit so that he can no longer oppose him.
It could be the traditional villains from the original story, like the Titans or some powerful monsters. They might torture Percy to get information or just to cause chaos.
In Kidnaped Izuku Fanfiction, likely antagonists could be rival villains who see Izuku as a threat to their plans. For example, those who want to stop him from becoming a great hero. It could also be villains who are after his unique quirk. Maybe they want to study it or use it for their own evil purposes. Another possibility is that it could be a group with a vendetta against the hero school he attends, and they target Izuku to send a message.
There could also be a group of villains working together to kidnap Sonic. For instance, a combination of Eggman and some of his more powerful robot creations along with a couple of other villains from Sonic's rogues gallery. They might have a grand plan that requires Sonic's capture, like using his power to open a portal to a world full of chaos energy that they can then control.
A jealous rival of Inuyasha might kidnap Kagome. For example, another demon who wants Inuyasha for himself might think that by taking Kagome, he can get Inuyasha to do his bidding. This would create a lot of drama and conflict between Inuyasha and the kidnapper.
Even old enemies of the demigod world, who see Percy and Jason as threats, could be the antagonists. They might use deception and betrayal as a way to weaken the demigod forces, knowing that Percy and Jason are important figures among them.
Perhaps some rogue ninja from other villages. They might see Naruto as a symbol of Konoha's power and want to take him down to weaken Konoha. These rogue ninjas could be led by a powerful and vengeful shinobi who has a grudge against Konoha. So when Naruto is alone on a mission or something, they attack, and that's when Minato steps in to save him.