One possible fanfic could be about Goku's intense training before the Cell Games. He might be shown pushing his limits in the Hyperbolic Time Chamber, trying out new techniques and forms to defeat Cell. Maybe he discovers a new power level that no one, including himself, expected.
It could be someone from Goku's past who has a vendetta against him and takes advantage of the chaos during the Cell Games. For instance, an old enemy who was thought to be defeated but managed to come back stronger and wants to finish Goku off while he's weakened from the fight with Cell.
Another possible main character could be the villain that forces the two Gokus to meet. This villain could be a new, super - powerful threat that the two Gokus need to deal with. Their meeting becomes a crucial part of the story to defeat this powerful foe.
One common theme is the clash of ideologies. Goku is all about protecting the innocent and having a fair fight, while Cell is more about self - preservation and domination at first.
Well, it could be about Goku Jr learning some of Goku's most powerful moves. Maybe Goku teaches him the Kamehameha. They might also go on an adventure together, like fighting a new and powerful enemy that neither could face alone.
There could also be a moment of self - discovery for both of them. Goku might see his past self in Kid Goku and realize how far he has come, while Kid Goku could get a glimpse of his future potential through meeting his adult self. They could share stories about their friends and enemies, like how Goku could talk about Vegeta and Frieza to Kid Goku, and Kid Goku could tell Goku about his early battles with the Red Ribbon Army.
There could also be other characters from the Dragon Ball universe making an appearance. For example, Vegeta might show up. He could be curious about Fem Goku and how she compares to Goku in terms of power. Or Bulma could be there, perhaps she's interested in the technology or biology behind Fem Goku's existence.