One consequence could be that he becomes extremely powerful. His physical abilities like strength, speed, and endurance are enhanced. He can also use more powerful jutsus with the extra chakra boost from the Kyuubi.
One interesting way is when Naruto absorbs chakra through his shadow clones. In some fanfictions, the clones can be used not just to gather information or attack, but also to absorb the chakra of the opponents they interact with. Then, they transfer this absorbed chakra back to Naruto, making him more powerful.
Perhaps there is an ancient artifact or a powerful curse that causes Naruto to absorb all chakra. In the fanfiction world, it's common to introduce such unique elements. For example, he might find a magical scroll that, when opened, starts sucking in all the chakra in the vicinity and then channels it into Naruto. Or it could be a curse placed on him by an enemy, but instead of harming him, it gives him this strange power to absorb all chakra.
The consequence might also be a shift in the balance of power in the Naruto universe. With all that chakra, Naruto could potentially change the political situation. He could end wars single - handedly or force the different ninja villages to re - evaluate their strategies. Moreover, his own physical and mental state might be affected. There could be a struggle within him to keep his identity intact while dealing with such an overwhelming power source.
He could share it with Hinata. Given their relationship, Naruto might transfer some of his chakra to Hinata to protect her during a dangerous situation. This would also strengthen their bond further in the fanfiction.
One interesting concept could be a character unlocking the hidden potential of the chakra gates in a unique way. For example, they might discover a new sequence of opening the gates that gives them powers beyond what was thought possible in the original Naruto lore.
Perhaps the origin of the chakra chains lies in Naruto's connection to the tailed beasts. Since he has a unique bond with the nine - tailed fox, the chakra chains might be a manifestation of that bond, combined with his own latent Uzumaki powers. It's possible that as he grew stronger and his understanding of chakra deepened, this ability was awakened.
One implication could be that Naruto becomes more powerful in combat. The chakra chains can be used as a weapon or a form of defense, allowing him to hold opponents in place or deflect attacks.
Perhaps Naruto unlocks the chakra chains because of a special item he discovers in Wave. This item could be something that has a connection to his past or to the chakra chains themselves. It might emit a certain energy that interacts with Naruto's chakra, causing the chains to be unlocked. Another possibility is that Naruto's encounter with the local chakra environment in Wave is different from what he's used to in Konoha. This new environment could act as a catalyst, triggering a reaction in his chakra system that results in the unlocking of the chakra chains.
Well, Naruto could also turn to his friends for help. In the Naruto universe, teamwork is highly emphasized. His friends like Sasuke, Sakura, and others have their own unique abilities. They could cover for Naruto's lack of chakra and together they could come up with strategies to fight opponents. Maybe Sasuke could use his Sharingan and ninjutsu skills, while Sakura could use her medical and combat skills to support the group.