Pain would still be a likely candidate. His Rinnegan gives him a powerful and commanding presence. He has the ability to see the big picture and make strategic decisions for the group.
If Naruto became the leader of Akatsuki in fanfiction, his leadership would change their goals significantly. Naruto has always been against the Akatsuki's violent and often cruel methods. He might start by changing the Akatsuki's internal structure. Instead of being a group that operates in the shadows and uses fear, he could make it an open organization. Their new goal could be to bridge the gaps between different ninja villages. For example, he could use the Akatsuki's members' diverse skills to facilitate trade and cultural exchange between villages. This would be a huge departure from the Akatsuki's traditional goals of domination and destruction.
Well, Naruto might change Akatsuki's goals by introducing his own values. Naruto believes in protecting the village and friends. So he could steer Akatsuki away from their original plans of chaos and destruction. For example, he might focus the group on protecting the shinobi world from greater threats rather than causing internal strife.
If Naruto becomes the leader of Akatsuki in fanfiction, he might try to change the Akatsuki's goals. Instead of causing chaos and destruction, he could lead them towards a more positive path, like using their power to protect the villages rather than attacking them.
If Naruto became the leader of the Akatsuki in fanfiction, it would completely change the dynamics of the organization. He might try to reform it from the inside. Instead of the Akatsuki's original goals of chaos and destruction, Naruto could steer them towards more positive ends, like using their power to protect the weak or broker peace between the ninja villages.
A plot twist might be that Naruto discovers that the Akatsuki was actually formed with good intentions in the past, but got corrupted over time. As the leader, he decides to go back to the original purpose. He then has to fight against the current power - hungry members while also trying to convince the other villages that the Akatsuki can be a force for good again. This would create a lot of tension and interesting character dynamics.
One big challenge would be winning over the trust of the existing Akatsuki members. They have been following a very different ideology, and Naruto's more positive and peace - loving approach would be quite different for them. Also, the ninja world would be very suspicious of Naruto leading such a feared group. He'd have to prove that his leadership is going to change the Akatsuki for the better.
If Naruto becomes the leader of Akatsuki, it would completely flip the Naruto universe on its head. First, Naruto's ideology of peace and friendship would clash with Akatsuki's original goals of collecting tailed beasts. He might try to reform Akatsuki from within, turning it into a group that actually protects the villages instead of causing chaos. This could lead to some very interesting alliances. For example, he might be able to convince some of the Akatsuki members who have their own tragic backstories, like Sasori or Deidara, to join his new cause. Also, the other villages' reactions would be mixed. Some might be extremely suspicious at first, while others could see it as an opportunity for a new kind of peace in the shinobi world.
Well, if Naruto were the leader of Akatsuki, the whole dynamic of the organization would change drastically. First of all, Naruto's ideology of peace through understanding would likely be imposed on the members. He might try to reform some of the more villainous members like Hidan or Kakuzu. For example, instead of using brute force to achieve their goals, Naruto could lead them to use diplomatic means. He would probably also try to find a way to co - exist with the Hidden Villages rather than oppose them. This would completely rewrite the plot of the Naruto universe as we know it.
One major challenge would be changing the Akatsuki's reputation. They're known as a group of villains, and Naruto would have to work hard to make them seem more like a force for good. Another challenge would be dealing with the internal power struggles among the members. Some might not be happy with Naruto's leadership style. Also, he'd have to face the opposition from the Hidden Villages who would be very suspicious of his new role.