His magical abilities might develop in a different way. The Malfoys could introduce him to different types of magic or magical artifacts. Maybe he'd learn more about the Dark Arts in a different context, not for evil purposes but just to understand it better. He could also become more skilled in areas like Occlumency earlier on, since the Malfoys might see it as an important skill to protect their family secrets. His relationship with his Gryffindor traits would be tested. He might still have his bravery, but it could be expressed in different ways, like standing up to the Malfoy family's wrongdoings.
In this fanfiction scenario, Harry's character development would be quite complex. He'd be in an environment where he's constantly surrounded by the Malfoy's Slytherin - like qualities. He might start to develop a more cunning side to himself. However, his basic goodness would still be there. He could use his new - found cunning to outwit the darker elements in the wizarding world. His social skills would also change. Instead of having the easy - going friendships he had in the original story, he'd have to be more diplomatic, especially when dealing with the Malfoy family's connections. His view of the wizarding world would be much more nuanced, seeing both the good and bad sides of different houses and families more closely.
He'd be more confident. With Sally's love and support, he wouldn't have the self - doubt that he had in the original story. He'd be quicker to trust people and might be more open - minded about different forms of magic.
He'd likely be more inquisitive about different forms of magic. Instead of just relying on the spells taught at Hogwarts, he'd constantly seek out new magus - based knowledge.
Harry would likely become more feared by some in the wizarding world. Since the Basilisk is often seen as a terrifying and dangerous creature, his connection to it might make others view him with suspicion. He would also have to grapple with the darker side of magic that the Basilisk represents, which could make him more brooding and introspective.
He'd be more confident. With a loving mother around, he wouldn't have the insecurities that came from growing up with the Dursleys.
His personality might become more reserved. Growing up in the Malfoy household, he'd be surrounded by Slytherin values. So he could be more calculating and less impulsive compared to his original self. But he would still have that core of kindness from his parents.
Harry could be more distrustful of adults. Since he doesn't have a positive family figure in the orphanage, when he meets the wizarding world adults like Dumbledore, he might be more skeptical and less likely to blindly follow them. Also, his sense of loyalty might be more focused on the orphans he grew up with rather than just his Gryffindor housemates at first. He might have a harder time adjusting to the hierarchical and sometimes elitist nature of the wizarding world, coming from an environment where everyone was more or less on equal footing in terms of being an orphan.
His character would likely be more confident. Growing up with a loving mother like Lily, he wouldn't have the insecurities that came from the Dursleys' treatment.
Harry would be more confident in his physical abilities. Since Raiden is a powerful fighter, he'd train Harry to be strong and fearless in combat. This would be different from the Harry we know who often relied on his wits and magic in dangerous situations. Harry might also be more stoic, like Raiden, and not show his emotions as easily.
Harry would be more daring. Jack Sparrow's influence would make him less afraid of taking risks. In the wizarding world, this could mean he'd be quicker to explore dark and dangerous places. He might not wait for permission or for a group to support him, but rather just dive in like Jack does when facing a new situation on the sea.
Harry's character would develop a sense of divinity within him. Since he's raised by Greek gods, he'd have a different relationship with power. He wouldn't fear power as much as he might in the original story. Instead, he'd see it as a natural part of his being. He'd be more in tune with nature and the elements, like the gods are. His relationships with other characters would also change. He might be more aloof towards some of his Hogwarts friends at first, as he'd have this whole other world of experiences from his upbringing among the gods that they couldn't understand right away.