Perhaps in the fanfic, there is a love triangle situation involving Ron. If Harry unknowingly gets in the way of Hermione's relationship with Ron, she could develop hatred towards him. Another aspect could be that Hermione feels Harry is getting all the credit for their group's achievements, while she is doing a lot of the behind - the - scenes work, which makes her resentful.
One possible reason could be a miscommunication. Maybe Hermione accidentally reveals a secret of Harry's that he didn't want known, and this causes him to feel betrayed and start to hate her. Another reason could be jealousy. If Hermione gets more attention or praise for her magical abilities than Harry in the fanfic, he might develop feelings of envy and hatred. Or perhaps there's a love triangle situation where Hermione is involved with someone Harry doesn't like, and that causes his hatred.
Well, in 'harry hates hermione fanfiction', it could be that the writer is trying to show how misunderstandings can lead to such extreme emotions. For example, perhaps there was a miscommunication about a spell or a magical event that made Harry wrongly think Hermione had betrayed him. Or it could be a way to explore how different personalities might clash more severely than shown in the original series, like Harry's impulsive nature conflicting more with Hermione's logical thinking.
Perhaps in this fanfic, the Weasleys have some actions that conflict with Harry and Hermione's values. For example, if the Weasleys were to make a deal with a dark wizard for the sake of their family's safety and Harry and Hermione found out. This could lead to a rift and hatred. Also, it could be related to a love triangle situation in a very convoluted way. Maybe one of the Weasleys unknowingly gets in the way of Harry and Hermione's relationship, or vice versa, which causes animosity.
It could be that in the fanfic's plot, the Weasleys have some actions that go against Hermione's principles. Say, they might be involved in some pranks that have negative consequences for Hermione's studies or personal goals, and that's why she hates them.
Maybe in the fanfic, there could be a misunderstanding between them. For example, Ron might have accidentally broken Harry's trust in some way, like revealing a secret of Harry's that he wasn't supposed to.
Maybe in that fanfic, there are misunderstandings between Harry and the Weasleys. For example, they might have had an argument over something like magic use or family values that led Harry to dislike them.
Another aspect could be Ron's jealousy issues. In the original story, Ron sometimes gets jealous of Hermione's friendship with Harry or her academic achievements. In fanfiction, this jealousy could be exaggerated to a point where Hermione can't tolerate it anymore and thus is written as hating him. For example, if Ron constantly tries to undermine her success out of jealousy, it would be a valid reason for her to develop strong negative feelings towards him.
There may be some fanfics out there with this premise, but it goes against the general relationship dynamics in the official 'Harry Potter' universe. Usually, Harry respects and values Hermione. If such a fanfic exists, it might be written by someone who wants to explore a really dark or different side of the story, like if there was a major event that made Harry turn against Hermione in that fictional narrative. But I haven't actually come across one myself.
One reason could be a divergence from the original character traits. In the original story, Hermione and Ron have a complex relationship with love and friendship. Fanfiction that misrepresents Hermione's feelings towards Ron might go against the essence of her character. Maybe the fanfiction portrays her as hating Ron in a way that doesn't fit with her growth and development in the official series.
Another reason could be jealousy. Maybe Hermione gets jealous when Harry spends a lot of time with other characters, like Ginny. This could lead to arguments as Hermione might feel left out or unimportant in Harry's life.