One common plotline is Naruto leaving the Leaf village in anger. He might then team up with former enemies who also have grudges against the Leaf. For instance, he could form an alliance with Orochimaru's followers who also have issues with the Leaf's power structure.
Often, there's a plotline where Naruto and Obito are on opposite sides of a conflict within the fanfiction. Naruto is fighting for the good of the village and Obito is working against it. Naruto's hatred for Obito grows as Obito continues to cause chaos. There might also be a plotline where Naruto discovers some new, even more terrible deeds that Obito has committed, fueling his hatred further.
Some fanfictions have Naruto uncovering dark secrets about Konoha. These secrets could be about the actions of the previous Hokages or the village elders. Discovering these secrets makes Naruto lose faith in Konoha and start to hate it.
One common plotline could be Naruto leaving his family behind and finding a new family in his friends. For example, he might feel so estranged from his blood relatives that he decides to build a closer bond with Sasuke, Sakura, and Kakashi, seeing them as his true family. Another plotline could involve Naruto trying to discover the reasons behind his hatred. Maybe he uncovers some long - hidden family secrets that made him develop such strong negative feelings.
One common plotline is Naruto realizing Hinata's worth after some event. For example, Hinata might save Naruto from a dangerous situation, and that makes Naruto see her in a new light and start to develop stronger feelings. At the same time, he could start to distance himself from Sakura because of her continued focus on Sasuke. Another plotline could be Hinata and Naruto getting paired up for a mission, during which they bond more closely while Naruto realizes how different she is from Sakura in terms of her loyalty and selflessness.
One possible reason could be feeling betrayed by the village's secrets and politics. Maybe he discovers some dark underbelly of the Leaf Village that makes him lose faith in it.
One possible plotline could be that Naruto discovers a system in his village that favors certain ninja clans over others. He then decides to fight against this system to bring equality. For instance, in terms of training resources or mission assignments.
It completely flips the original story. In the original, Naruto loves the Leaf Village and is willing to sacrifice everything for it. In this fanfiction, his hatred changes the dynamic. It might make his relationships with other characters like Sasuke, who also had issues with the village, more complex.
One common plotline is betrayal. Maybe his team betrays him for some gain, like siding with a powerful villain in exchange for something they desire. This makes Spider - Man feel angry and hateful towards them. Another is the team being too self - centered. They focus only on their own goals and achievements, leaving Spider - Man feeling left out and resentful.
A possible theme is rivalry. The fanfiction might portray Hinata as a rival to Naruto in some aspect, causing his hatred. For example, in a political or power - struggle context within the Naruto universe.
Often, it could be about Naruto's loyalty to his friends. Danzo has been shown to be willing to sacrifice others for the so - called greater good. Naruto, who values his friends highly, would hate that. So, the theme of friendship and loyalty being at odds with Danzo's actions is common. Also, the idea of Naruto seeing through Danzo's power - hungry nature and hating him for it is quite prevalent in such fanfictions.