In this fanfic, perhaps Madara kidnaps Naruto because he sees Naruto as a threat to his grand scheme. He figures if he can keep Naruto out of the way, his plans to reshape the ninja world will go more smoothly. Madara could then try to brainwash Naruto or turn him against his friends and village. For example, he might show Naruto the so - called 'truth' about the ninja world's history in a twisted way to make Naruto question his loyalties.
One possible plotline could be that Madara kidnaps Sakura to use her as a bargaining chip against Naruto and the Hidden Leaf. Maybe he thinks her medical skills can be useful to heal his own troops or himself. Another could be that Madara has some strange fascination with Sakura's strength and potential, and wants to study her or turn her to his side.
The plot could involve Naruto studying Madara's old techniques and strategies. He might be fascinated by Madara's ability to control the Nine - Tails in the past. So, Naruto starts to dig deeper into Madara's history and teachings, trying to incorporate some of his ideas into his own ninja way while still maintaining his core values.
Well, one possible plot could be that Naruto discovers a new jutsu specifically designed to counter Madara's powerful Sharingan abilities. This jutsu might be related to the Sage of Six Paths' power that he already has. With this new power, Naruto engages in a series of intense battles with Madara, each time getting closer to figuring out Madara's weaknesses.
One possible plot could be that Naruto, upon absorbing Madara, gains not only his power but also some of his memories. This could lead to Naruto having an internal struggle as he tries to separate his own values from Madara's more ruthless ones. He might also face distrust from the shinobi world as they fear he'll become like Madara. With this new power, Naruto could potentially reshape the ninja world in ways he never thought of before, but he has to first come to terms with what it means to have a part of his enemy within him.
One possible plot could be that Naruto discovers his true heritage as the grandson of Madara and Hashirama. This revelation could lead to a power struggle within the village as some might fear his new - found connection to such powerful predecessors. Naruto, on the other hand, could use this knowledge to try and bridge the gap between the different clans that have been at odds for generations, following the example set by his grandfathers.
Another idea is that the fanfic delves into a what - if scenario. What if Naruto's grandfather had been able to change Madara's path? This could lead to a completely different Naruto - verse, where the Uchiha clan's history and the overall power balance in the ninja world are altered. The fanfic could then explore how Naruto's life and his journey as a ninja would be different in this alternate reality.
Well, the plot could involve Naruto having some sort of hidden origin that links him to Madara as his brother. Maybe Naruto discovers this truth and has to deal with the implications. He could use his godlike powers to either unite or oppose the Uchiha clan, depending on how the story goes.
Perhaps the grandson is on a mission to redeem his family name. He discovers a hidden power that Madara had but never fully utilized. This power could be related to the Sharingan or some other Uchiha ability. He then has to learn how to control this power while also facing off against enemies who want to use him or stop him. Along the journey, he forms a team of unlikely allies who help him in his quest, and they all grow together as they face various challenges.
Well, one possible plot twist could be that Kohana has a hidden motive that's not as evil as it seems at first. Maybe she's being controlled by a greater force and Naruto realizes this and tries to save her instead of just escaping. Another could be that Kohana is actually from a long - lost clan that has a prophecy related to Naruto, and the 'kidnapping' is a way to start fulfilling that prophecy.
In this kind of fanfic, Naruto might be in a really tough situation. Orochimaru could be after his chakra or some secret power within him. Maybe Naruto will try to use his shadow clones to escape or call for help using his toad summons.